mlMLToDicomTools.h File Reference

Header file with tool functions converting ML to DICOM data structures. More...

#include "MLMLToDicomToolsSystem.h"
#include <mlModuleIncludes.h>
#include <DCMTree_Lib.h>

Go to the source code of this file.

Namespaces
namespace	ml
	Main documentation file for ML users and developers.
namespace	ml::MLToDicomTools
	Tool function namespace with many tool functions for the conversion of DICOM information and tag values to comparable ML information objects.

Functions
ML_MLToDicomTools_EXPORT void	ml::MLToDicomTools::getSpacingImagePositionAndOrientationPatientFromMLWorldMatrix (MedicalImageProperties imgProps, Vector3 &pixelSpacing, Vector3 &imagePositionPatient, Vector6 &imageOrientationPatient, std::string *issueMessages=nullptr)
	Gets DICOM compliant values for tags Pixel Spacing, Image Position Patient, and Image Orientation Patient from the ML world matrix in imgProps.
ML_MLToDicomTools_EXPORT void	ml::MLToDicomTools::setPixelData (DCMTree::TagPtr pixelDataTag, PagedImage &inImg, MLDataType overrideDataType=ML_INVALID_DATA_TYPE, double *minVal=nullptr, double *maxVal=nullptr, const SubImageBox *overrideBox=nullptr)
	Gets an input image as pixel data with getTile from inImg and sets it as value of pixelDataTag.
ML_MLToDicomTools_EXPORT void	ml::MLToDicomTools::setVectorGridData (DCMTree::TagPtr vecGridDataTag, PagedImage &inImg)
	Gets a floating point vector field with getTile from inImg and sets it as OF value of the vecGridDataTag.
ML_MLToDicomTools_EXPORT std::string	ml::MLToDicomTools::addAndSetSEGPixelDataTag (DCMTree::TreePtr dcmTree, const BitImage &bitImage, bool writePadded)
	Stores the bit mask given by BitImage in newly created PixelData tag in dcmTree; it does not set any related tags such as Rows, Columns etc.
ML_MLToDicomTools_EXPORT std::string	ml::MLToDicomTools::appendImagePixelModuleTags (DCMTree::TreePtr resultTree, unsigned int samplesPerPixel, const std::string &photometricInterpretation, unsigned int rows, unsigned int columns, unsigned int bitsAllocated, unsigned int bitsStored, unsigned int highBit, unsigned int pixelRepresentation, bool writePlanarConfiguration=false, unsigned int planarConfiguration=0, bool writeMinMaxPixelValue=false, double smallestPixelValue=0, double largestPixelValue=0, MLint numberOfColorChannels=0, const std::vector< std::string > &cDimInfos=std::vector< std::string >())
	Appends required DICOM tags to resultTree according to DICOM standard, C.7.6.3 Image Pixel Module Attributes.
ML_MLToDicomTools_EXPORT std::string	ml::MLToDicomTools::setSegmentationBinaryImagePixelTags (DCMTree::TreePtr &dcmTree, const BitImage &inputBitImage)
	Set Image Pixel / Segmentation Image Module Attribute tags for a binary segmentation image using setImagePixelTags() and appendImagePixelModuleTags(), specific tags for the SEG IOD and smallest/largest pixel values are not added/written.
ML_MLToDicomTools_EXPORT std::string	ml::MLToDicomTools::setSegmentationFractionalImagePixelTags (DCMTree::TreePtr &dcmTree, const PagedImage &inputBitImage)
	Set Image Pixel / Segmentation Image Module Attribute tags for a fractional segmentation image using setImagePixelTags() and appendImagePixelModuleTags(), specific tags for the SEG IOD and smallest/largest pixel values are not added/written.
ML_MLToDicomTools_EXPORT SubImageBox	ml::MLToDicomTools::determineFrameRegion (DCMTree::TreePtr dcmTree, const FieldContainer *treeInfos, PagedImage &inImg, Vector3 *srcImgPosPatient=nullptr, Vector3 *dstImgPosPatient=nullptr, std::string *errorMessage=nullptr, bool useFullTUDimExtentFromInImgInSliceWiseUpdate=false, AdvancedTagSetUpArgs *configParams=nullptr)
	If possible then determine and return the region in inImg which corresponds to the region the dcmTree belongs to.
ML_MLToDicomTools_EXPORT bool	ml::MLToDicomTools::setUpPhotometricInterpretation (DCMTree::TreePtr dcmTree, MLint numColorChannels, const std::vector< std::string > &cDimInfos)
	Evaluates the number of color channels and the cDimInfos of the input image, checks for valid settings and sets the Photometric Interpretation tags in dcmTree such that it fits best the ML image.
ML_MLToDicomTools_EXPORT std::string	ml::MLToDicomTools::setImagePixelTags (DCMTree::TreePtr dcmTree, const FieldContainer *treeInfos, PagedImage &inImg, bool adjustSliceWise, bool reportNonOrthoWorldMatrix, AdvancedTagSetUpArgs *configParams=nullptr)
	Gets the input image and its properties, checks whether it is DICOM-like and if yes it sets image pixel related tags such that dcmTree contains the input image afterwards.

Detailed Description

Header file with tool functions converting ML to DICOM data structures.

Author

Wolf Spindler

Date

2013-10-31

Definition in file mlMLToDicomTools.h.