WrapFiberSet¶

MacroModule¶

genre	`FiberClustering`
author	`Jan Klein`
package	`FMEwork/Release`
definition	WrapFiberSet.def
see also	`ColorizeFiberSet`, `SoFiberVis`
keywords	`DTI`, `fiber`, `clustering`, `wrap`, `isosurface`

Purpose¶

The module WrapFiberSet wraps the incoming fiber set or fiber set container by an envelope of a user-defined distance to the fibers. The output is either a WEM iso-surface or a voxelized ML image.

Usage¶

Use as inputs a fiber bundle and an input image which covers the bundle. The finer the resolution of the input image, the smaller the thickness of the envelope can be chosen.

Details¶

The larger the Thickness, the larger must be the extent of the input image so that the margin around the fibers is calculated correctly.

Windows¶

Default Panel¶

../../../Projects/MLDiffusionMRI/Modules/Macros/mhelp/Images/Screenshots/WrapFiberSet._default.png

Input Fields¶

input0¶

name: input0, type: Image¶: Image with an extent so that incoming fiber set is completely covered. The image values are of no interest.

baseIn0¶

name: baseIn0, type: MLBase¶: FiberSetContainer or FiberSet.

Output Fields¶

baseOut0¶

name: baseOut0, type: SoNode¶: A WEM iso-surface.

ouput0¶

name: ouput0, type: Image¶: An ML image with the voxelized fiber bundle

Parameter Fields¶

Field Index¶

Alpha: Float

Apply: Trigger

Color: Color

On fiber change: Bool

On ML image change: Bool

On parameter change: Bool

Thickness: Float

Visible Fields¶

Alpha¶

name: alpha, type: Float, default: 1, minimum: 0, maximum: 1¶: Sets the alpha value of the output WEM.

Color¶

name: color, type: Color, default: 0.792156994342804 0.792156994342804 0.792156994342804¶: Sets the color of the output WEM.

Thickness¶

name: thickness, type: Float, default: 3¶: Sets the distance in mm of the iso-surface from the fibers.

On ML image change¶

name: autoUpdateMLImage, type: Bool, default: TRUE¶: If checked, the module computes anew on changes of the input ML image.

On fiber change¶

name: autoUpdateInvScene, type: Bool, default: TRUE¶: If checked, the module computes anew on changes of the input fiber set.

On parameter change¶

name: autoUpdateParameter, type: Bool, default: TRUE¶: If checked, the module computes anew on any parameter change.

Apply¶

name: apply, type: Trigger¶: If pressed, the module computes anew.